Basic Information
Locus ID:
jg38069
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12772489 | 12783012 | + | jg38069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 70,558.26 Da | 32.78 | 102.53 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 492 | 614 | 1.2E-21 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 1.1E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 385 | 8.5E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 463 | 615 | 5.76E-41 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 564 | 617 | 1.6E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 449 | 563 | 1.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 387 | 2.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 293 | 9.6E-64 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 488 | 640 | 19.820827 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 494 | 516 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011089544.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Sesamum indicum] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9TZN7 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105170475 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology