Basic Information
Locus ID:
jg37899
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10335727 | 10336908 | + | jg37899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 42,857.08 Da | 36.60 | 108.40 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 145 | 157 | 0.14 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 2.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 368 | 1.11E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 366 | 1.5E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 187 | 2.3E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 281 | 6.8E-17 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 166 | 7.32692 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_011082523.1 | probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9TD22 | probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Sesamum indicum OX=4182 GN=LOC105165265 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology