Basic Information
Locus ID:
jg37794
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9534258 | 9537400 | + | jg37794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 110,493.72 Da | 30.45 | 105.64 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 175 | 196 | 0.12 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 270 | 329 | 2.7E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 135 | 2.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 534 | 593 | 2.9E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 711 | 982 | 2.9E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 74 | 3.1E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 710 | 985 | 1.04E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 258 | 598 | 7.06E-69 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 354 | 1.09E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 285 | 2.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 386 | 8.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 190 | 1.7E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 794 | 1004 | 9.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 626 | 1.1E-62 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 709 | 793 | 4.2E-18 | - |
| SMART | SM00369 | LRR_typ_2 | 244 | 268 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 579 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 461 | 484 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 532 | 410.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 709 | 985 | 2.2E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 709 | 992 | 39.028934 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 2.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 511 | 524 | 2.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_020550129.1 | MDIS1-interacting receptor like kinase 1 [Sesamum indicum] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8M8V1G6 | MDIS1-interacting receptor like kinase 1 OS=Sesamum indicum OX=4182 GN=LOC105165681 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology