Basic Information
Locus ID:
jg37725
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8987413 | 8993227 | - | jg37725 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 64,705.77 Da | 42.03 | 76.23 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 433 | 495 | 3.55417E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 55 | 313 | 2.19384E-143 | - |
| Pfam | PF00069 | Protein kinase domain | 56 | 314 | 1.4E-78 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 432 | 495 | 1.6E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 362 | 420 | 1.5E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 343 | 521 | 1.2E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 322 | 2.7E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 141 | 1.6E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 497 | 1.5E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 322 | 4.4E-61 | - |
| SMART | SM00054 | efh_1 | 433 | 461 | 0.076 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 4.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 361 | 389 | 0.0078 | IPR002048 |
| SMART | SM00220 | serkin_6 | 56 | 314 | 2.0E-104 | IPR000719 |
| SMART | SM00054 | efh_1 | 397 | 425 | 1.6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 357 | 392 | 12.142296 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 11.02648 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 9.185384 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 314 | 50.364403 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 442 | 454 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 573 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_022887780.1 | calcium-dependent protein kinase 8-like [Olea europaea var. sylvestris] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GF31 | Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23677 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology