Basic Information
Locus ID:
jg3747
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 6255057 | 6259177 | - | jg3747 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 86,634.08 Da | 47.19 | 76.90 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 462 | 722 | 5.71094E-86 | - |
| CDD | cd01989 | STK_N | 14 | 161 | 1.86545E-56 | - |
| Pfam | PF00582 | Universal stress protein family | 14 | 135 | 7.6E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 460 | 710 | 5.6E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 438 | 715 | 9.58E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 14 | 136 | 9.21E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 423 | 528 | 6.9E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 4 | 158 | 1.9E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 529 | 739 | 2.6E-48 | - |
| SMART | SM00220 | serkin_6 | 456 | 719 | 1.8E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 456 | 719 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 574 | 586 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 189 | - | - |
| Coils | Coil | Coil | 371 | 434 | - | - |
| Coils | Coil | Coil | 322 | 342 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_011094049.1 | U-box domain-containing protein 35 isoform X1 [Sesamum indicum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9GP62 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20335 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology