Basic Information
Locus ID:
jg37396
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6140968 | 6150798 | - | jg37396 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 108,571.68 Da | 49.16 | 83.81 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 786 | 943 | 7.64717E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 355 | 942 | 7.4E-85 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 81 | 183 | 5.9E-23 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 54 | 183 | 1.31E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 352 | 945 | 3.11E-113 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 197 | 281 | 3.1E-7 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 45 | 196 | 1.2E-32 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 756 | 950 | 9.0E-57 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 340 | 550 | 7.8E-69 | - |
| SMART | SM00695 | dusp | 76 | 186 | 2.3E-27 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 57 | 184 | 19.03842 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 354 | 945 | 58.256821 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 355 | 370 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 887 | 904 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_020550363.1 | ubiquitin carboxyl-terminal hydrolase 9 [Sesamum indicum] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9TEW4 | Ubiquitin carboxyl-terminal hydrolase OS=Sesamum indicum OX=4182 GN=LOC105164413 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology