Basic Information
Locus ID:
jg37220
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4535000 | 4538622 | - | jg37220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 74,627.43 Da | 40.41 | 95.22 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 417 | 678 | 3.02475E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 415 | 676 | 1.5E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 2.7E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 240 | 6.05E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 676 | 1.18E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 680 | 5.6E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 254 | 1.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 489 | 2.8E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 141 | 2.2E-27 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 681 | 32.428356 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011081121.1 | LRR receptor kinase BAK1 [Sesamum indicum] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T9W0 | LRR receptor kinase BAK1 OS=Sesamum indicum OX=4182 GN=LOC105164210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology