Basic Information
Locus ID:
jg37077
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 3495240 | 3497088 | - | jg37077 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 46,331.26 Da | 39.07 | 87.79 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 19 | 229 | 2.0755E-92 | - |
| Pfam | PF00183 | Hsp90 protein | 215 | 403 | 2.4E-85 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 32 | 185 | 1.1E-10 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 291 | 403 | 1.29E-50 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 10 | 240 | 4.52E-59 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 290 | 403 | 9.5E-58 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 8 | 255 | 4.0E-80 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 32 | 170 | 0.0029 | IPR003594 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 30 | 39 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 97 | 1.9E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 31 | 53 | 1.9E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 115 | 1.9E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 123 | 145 | 1.9E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 175 | 192 | 1.9E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 10 | 30 | 1.9E-61 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 266 | - | - |
| Coils | Coil | Coil | 255 | 275 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_011080917.1 | heat shock protein 83 [Sesamum indicum] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T923 | heat shock protein 83 OS=Sesamum indicum OX=4182 GN=LOC105164060 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology