Basic Information
Locus ID:
jg36972
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
iron ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2741285 | 2742466 | - | jg36972 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 44,973.83 Da | 43.67 | 94.45 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 29 | 68 | 1.9E-5 | IPR001810 |
| Pfam | PF07734 | F-box associated | 234 | 315 | 9.5E-6 | IPR006527 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 79 | 1.44E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 76 | 9.1E-9 | - |
| SMART | SM00256 | fbox_2 | 32 | 72 | 2.0E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 131 | 318 | 6.9E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 26 | 72 | 9.523964 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00460 (Cyanoamino acid metabolism)
map00460 (Cyanoamino acid metabolism)
ko00966 (Glucosinolate biosynthesis)
map00966 (Glucosinolate biosynthesis)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01210 (2-Oxocarboxylic acid metabolism)
map01210 (2-Oxocarboxylic acid metabolism)
Reaction:
R08652 (L-Phenylalanine + 2 Oxygen + 2 [Reduced NADPH---hemoprotein reductase] <=> (Z)-Phenylacetaldehyde oxime + 2 [Oxidized NADPH---hemoprotein reductase] + CO2 + 3 H2O)
R09578 (L-Phenylalanine + 2 Oxygen + 2 [Reduced NADPH---hemoprotein reductase] <=> (E)-Phenylacetaldoxime + 2 [Oxidized NADPH---hemoprotein reductase] + CO2 + 3 H2O)
R09579 (L-Phenylalanine + Oxygen + [Reduced NADPH---hemoprotein reductase] <=> N-Hydroxy-L-phenylalanine + [Oxidized NADPH---hemoprotein reductase] + H2O)
R09580 (N-Hydroxy-L-phenylalanine + Oxygen + [Reduced NADPH---hemoprotein reductase] <=> N,N-Dihydroxy-L-phenylalanine + [Oxidized NADPH---hemoprotein reductase] + H2O)
R09581 (N,N-Dihydroxy-L-phenylalanine <=> (E)-Phenylacetaldoxime + CO2 + H2O)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012828236.1 | PREDICTED: F-box/kelch-repeat protein At3g23880-like [Erythranthe guttata] | 0 |
| TrEMBL | A0A830DE03 | F-box protein at3g07870 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_002815500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg36972 |
| Plantaginaceae | Plantago ovata | 6 | Pov_00020678, Pov_00033182, Pov_00034286, Pov_00036901 ... |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107019216 |