Basic Information
Locus ID:
jg3688
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4809433 | 4812495 | - | jg3688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 57,577.59 Da | 55.70 | 59.23 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 338 | 421 | 1.4E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 520 | - | - |
| Coils | Coil | Coil | 353 | 383 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_011094204.1 | protein WVD2-like 4 isoform X1 [Sesamum indicum] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9U8Z7 | protein WVD2-like 4 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105173962 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology