Basic Information
Locus ID:
jg36600
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 293759 | 294323 | + | jg36600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 15,610.82 Da | 43.92 | 89.64 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 20 | 118 | 6.6E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 127 | 6.74E-31 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 94 | 2.6E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 137 | 13.912816 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55550.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011081572.1 | probable L-type lectin-domain containing receptor kinase S.5 [Sesamum indicum] | 0 |
| Q9M2S4 | L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana OX=3702 GN=LECRKS4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TD03 | probable L-type lectin-domain containing receptor kinase S.5 OS=Sesamum indicum OX=4182 GN=LOC105164587 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg265, jg28762, jg36600 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22847 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011872 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 4 | nbisL1-mrna-5692, nbisL1-mrna-5695, nbisL1-mrna-5699 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0199250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G012380 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1011800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG055090 |
| Poaceae | Zea mays | 1 | Zm00001eb217820_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-58734, nbis-gene-58813 |