Basic Information
Locus ID:
jg36593
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 248358 | 251508 | - | jg36593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.86 | 78,162.12 Da | 44.67 | 100.70 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 371 | 391 | 1.8 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 264 | 286 | 1.9 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 238 | 261 | 0.12 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 582 | 604 | 1.8 | IPR001611 |
| Pfam | PF00646 | F-box domain | 66 | 103 | 6.9E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 533 | 681 | 2.59E-15 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 189 | 526 | 1.75E-30 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 100 | 4.97E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 157 | 276 | 1.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 469 | 675 | 1.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 468 | 2.8E-29 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 608 | 633 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 212 | 237 | 1.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 238 | 263 | 1.9E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 422 | 447 | 95.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 264 | 289 | 4.5E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 582 | 606 | 24.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 290 | 315 | 0.15 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 476 | 501 | 330.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 502 | 527 | 0.21 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 396 | 421 | 0.11 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 370 | 395 | 0.012 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 529 | 554 | 8.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 556 | 581 | 16.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_011081561.1 | EIN3-binding F-box protein 1-like isoform X1 [Sesamum indicum] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TCZ4 | EIN3-binding F-box protein 1-like isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105164578 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology