Basic Information
Locus ID:
jg36592
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
CONTAINS InterPro DOMAIN s Targeting for Xklp2 (InterPro IPR009675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 240980 | 247427 | + | jg36592 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 59,246.97 Da | 50.36 | 62.68 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 340 | 424 | 4.2E-26 | IPR027329 |
| SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 31 | 84 | 2.77E-5 | IPR010255 |
| Gene3D | G3DSA:1.10.420.10 | Peroxidase, domain 2 | 31 | 76 | 1.9E-7 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 541 | - | - |
| Coils | Coil | Coil | 355 | 382 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_011069988.1 | protein WVD2-like 5 isoform X1 [Sesamum indicum] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SSA1 | protein WVD2-like 5 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105155724 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology