Basic Information
Locus ID:
jg36564
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 78978 | 86735 | - | jg36564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.07 | 90,762.03 Da | 43.35 | 71.84 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 45 | 288 | 1.78E-12 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 584 | 624 | 8.27E-7 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 5 | 256 | 3.2E-6 | IPR011989 |
| Gene3D | G3DSA:2.30.30.140 | - | 575 | 633 | 1.2E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 781 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 796 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 828 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 807 | 828 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 574 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_020550223.1 | hepatoma-derived growth factor-related protein 2 [Sesamum indicum] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9I062 | Tudor domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04131 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology