Basic Information
Locus ID:
jg36061
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 13368403 | 13380408 | - | jg36061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 166,088.86 Da | 45.86 | 82.01 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 102 | 432 | 3.4E-110 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 96 | 468 | 1.76E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 90 | 445 | 2.5E-138 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 94 | 441 | 1.0E-160 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 96 | 433 | 121.359451 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 329 | 340 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 383 | 404 | 4.1E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 330 | 348 | 4.1E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 297 | 314 | 4.1E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 168 | 189 | 4.1E-41 | IPR001752 |
| Coils | Coil | Coil | 440 | 467 | - | - |
| Coils | Coil | Coil | 807 | 834 | - | - |
| Coils | Coil | Coil | 614 | 634 | - | - |
| Coils | Coil | Coil | 580 | 607 | - | - |
| Coils | Coil | Coil | 1325 | 1345 | - | - |
| Coils | Coil | Coil | 1416 | 1436 | - | - |
| Coils | Coil | Coil | 1236 | 1267 | - | - |
| Coils | Coil | Coil | 875 | 916 | - | - |
| Coils | Coil | Coil | 704 | 752 | - | - |
| Coils | Coil | Coil | 1297 | 1317 | - | - |
| Coils | Coil | Coil | 1138 | 1158 | - | - |
| Coils | Coil | Coil | 1104 | 1124 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_011090480.1 | kinesin-like protein KIN-12E [Sesamum indicum] | 0 |
| F4J1U4 | Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9U978 | kinesin-like protein KIN-12E OS=Sesamum indicum OX=4182 GN=LOC105171152 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology