Basic Information
Locus ID:
jg36058
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 13329811 | 13339469 | + | jg36058 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 100,210.17 Da | 49.22 | 80.02 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 724 | 887 | 4.34357E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 294 | 886 | 2.5E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 292 | 889 | 1.37E-107 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 284 | 516 | 1.7E-65 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 667 | 892 | 6.1E-55 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 294 | 889 | 56.325592 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 295 | 310 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 832 | 849 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_011088987.1 | ubiquitin carboxyl-terminal hydrolase 8 [Sesamum indicum] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A830BYV7 | Ubiquitin carboxyl-terminal hydrolase OS=Phtheirospermum japonicum OX=374723 GN=PHJA_001089000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology