Basic Information
Locus ID:
jg35955
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 12524166 | 12528820 | + | jg35955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 44,907.55 Da | 47.90 | 73.51 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 47 | 162 | 2.3E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 46 | 163 | 3.93E-24 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 107 | 2.3E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 76 | 168 | 2.3E-37 | - |
| SMART | SM00220 | serkin_6 | 25 | 345 | 3.2E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 10 | 345 | 12.386344 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 194 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011088817.1 | SRSF protein kinase 1 isoform X1 [Sesamum indicum] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9FWH6 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_30122 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology