Basic Information
Locus ID:
jg35607
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Rho GTPase-activating protein 7-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 4623288 | 4645658 | - | jg35607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 97,687.63 Da | 55.62 | 77.82 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 21 | 120 | 9.87537E-12 | - |
| CDD | cd00159 | RhoGAP | 181 | 318 | 5.62276E-35 | - |
| Pfam | PF00169 | PH domain | 21 | 124 | 3.9E-12 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 181 | 325 | 7.8E-32 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 626 | 706 | 4.3E-21 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 181 | 373 | 1.08E-34 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 15 | 131 | 1.29E-17 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 149 | 373 | 1.3E-42 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 9 | 127 | 4.0E-17 | IPR011993 |
| SMART | SM00233 | PH_update | 19 | 127 | 8.6E-16 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 178 | 369 | 2.9E-28 | IPR000198 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 172 | 372 | 30.610714 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 18 | 125 | 15.3672 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 817 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 833 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 415 | - | - |
| Coils | Coil | Coil | 836 | 863 | - | - |
| Coils | Coil | Coil | 675 | 709 | - | - |
| Coils | Coil | Coil | 591 | 611 | - | - |
| Coils | Coil | Coil | 616 | 650 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_011080411.1 | rho GTPase-activating protein 7 isoform X2 [Sesamum indicum] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TA81 | rho GTPase-activating protein 7 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105163670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology