halophFGD

Basic Information

Locus ID: jg35605

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: hydroxyproline O-arabinosyltransferase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr13	4602775	4607844	+	jg35605

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.80	37,009.13 Da	51.69	79.23	-0.40

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

KEGG Pathway

KO Term:

K20782 (hydroxyproline O-arabinosyltransferase [EC:2.4.2.58])

Pathway:

ko00514 (Other types of O-glycan biosynthesis) map00514 (Other types of O-glycan biosynthesis)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G13500.1
RefSeq	XP_011080408.1	hydroxyproline O-arabinosyltransferase 3 [Sesamum indicum]
Swiss-Prot	G7LG31	Hydroxyproline O-arabinosyltransferase RDN2 OS=Medicago truncatula OX=3880 GN=RDN2 PE=3 SV=1
TrEMBL	A0A6I9TCN9	hydroxyproline O-arabinosyltransferase 3 OS=Sesamum indicum OX=4182 GN=LOC105163666 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg1537, jg29894, jg35605, jg36566, jg4630, jg8523
Aizoaceae	Mesembryanthemum crystallinum	4	gene_17153, gene_17905, gene_9966, gene_9967
Amaranthaceae	Atriplex hortensis	5	Ah005072, Ah005073, Ah032343, Ah034803, Ah038287
Amaranthaceae	Beta vulgaris	4	BVRB_2g030960, BVRB_2g041690, BVRB_4g073690, BVRB_4g073700
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg17784, Sbi_jg21109, Sbi_jg22695, Sbi_jg30012 ... Sbi_jg43450, Sbi_jg62444
Amaranthaceae	Salicornia europaea	3	Seu_jg1018, Seu_jg16571, Seu_jg18450
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00004219, GOSA_00007208, GOSA_00018306
Amaranthaceae	Suaeda glauca	6	Sgl59148, Sgl59149, Sgl62374, Sgl66233, Sgl66911, Sgl70551
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000013319, gene:ENSEOMG00000017584 ... gene:ENSEOMG00000020257, gene:ENSEOMG00000020355, gene:ENSEOMG00000029773, gene:ENSEOMG00000042139, gene:ENSEOMG00000050145, gene:ENSEOMG00000051874
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.1BG0021720, CQ.Regalona.r1.2AG0004190 ... CQ.Regalona.r1.2AG0023450, CQ.Regalona.r1.2BG0005470, CQ.Regalona.r1.4AG0002210
Anacardiaceae	Pistacia vera	3	pistato.v30038820, pistato.v30050700, pistato.v30250560
Apiaceae	Apium graveolens	4	Ag11G04405, Ag7G01349, Ag7G01705, Ag9G01468
Arecaceae	Cocos nucifera	4	COCNU_02G017910, COCNU_04G006760, COCNU_12G004520 ... COCNU_16G002030
Arecaceae	Phoenix dactylifera	4	gene-LOC103701651, gene-LOC103705083, gene-LOC103716922 ... gene-LOC103719210
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.2504.V1.1, AsparagusV1_07.1688.V1.1 ... AsparagusV1_08.815.V1.1
Asteraceae	Flaveria trinervia	3	Ftri15G31300, Ftri16G19837, Ftri18G14732
Brassicaceae	Arabidopsis thaliana	3	AT2G25260.1, AT5G13500.1, AT5G25265.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10000212m.g.v1.0, Thhalv10004426m.g.v1.0 ... Thhalv10013935m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp2g22280.v2.2, Sp4g04380.v2.2, Sp6g30520.v2.2
Brassicaceae	Brassica nigra	6	BniB01g018020.2N, BniB02g049040.2N, BniB04g003850.2N ... BniB05g024840.2N, BniB07g039850.2N, BniB08g006360.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq04G2400, Ceq04G2402, Ceq05G0896, Ceq05G1620
Casuarinaceae	Casuarina glauca	5	Cgl04G2601, Cgl04G2606, Cgl04G2607, Cgl05G0908, Cgl05G1615
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g05430, gene.Cymno05g01840, gene.Cymno06g08030 ... gene.Cymno08g05450
Dunaliellaceae	Dunaliella salina	1	Dusal.0438s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g12710, gene.Thate01g26000, gene.Thate02g08060 ... gene.Thate07g07870
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.2004, evm.TU.LG07.1492, evm.TU.LG09.131
Plantaginaceae	Plantago ovata	3	Pov_00004805, Pov_00024396, Pov_00039380
Plumbaginaceae	Limonium bicolor	6	Lb0G36730, Lb1G02367, Lb2G12888, Lb2G12946, Lb7G35164 ... Lb7G35168
Poaceae	Echinochloa crus-galli	12	AH05.2640, AH06.534, AH07.3301, BH05.1185, BH05.2727 ... BH06.578, BH07.3119, CH01.2671, CH01.4786, CH05.1525, CH06.593, CH07.3189
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_1AG0004110, gene-QOZ80_1BG0052530 ... gene-QOZ80_5AG0374990, gene-QOZ80_5BG0421250, gene-QOZ80_6AG0511060, gene-QOZ80_6BG0463130
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0058910.1, HORVU.MOREX.r3.3HG0256430.1 ... HORVU.MOREX.r3.5HG0497880.1, HORVU.MOREX.r3.7HG0658270.1
Poaceae	Lolium multiflorum	5	gene-QYE76_018368, gene-QYE76_027711, gene-QYE76_028226 ... gene-QYE76_028268, gene-QYE76_052374
Poaceae	Oryza coarctata	6	Oco01G007650, Oco02G007970, Oco09G008470, Oco10G008630 ... Oco11G003670, Oco12G003660
Poaceae	Oryza sativa	3	LOC_Os01g16600.1, LOC_Os05g32060.1, LOC_Os06g08180.1
Poaceae	Paspalum vaginatum	3	gene-BS78_03G116500, gene-BS78_09G129000 ... gene-BS78_10G063300
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0207119, Pt_Chr0505473, Pt_Chr0603774, Pt_Chr0603856
Poaceae	Sporobolus alterniflorus	7	Chr02G026970, Chr03G001270, Chr05G004680, Chr08G003870 ... Chr11G021610, Chr18G007930, Chr22G009630
Poaceae	Thinopyrum elongatum	3	Tel1E01G400100, Tel3E01G322100, Tel7E01G293300
Poaceae	Triticum dicoccoides	6	gene_TRIDC1AG036380, gene_TRIDC1BG041460 ... gene_TRIDC3AG026020, gene_TRIDC3BG029740, gene_TRIDC7AG017470, gene_TRIDC7BG006730
Poaceae	Triticum aestivum	9	TraesCS1A02G241300.1, TraesCS1B02G253100.2 ... TraesCS1D02G241200.1, TraesCS3A02G187000.1, TraesCS3B02G216400.1, TraesCS3D02G190800.1, TraesCS7A02G143900.1, TraesCS7B02G046000.1, TraesCS7D02G145400.1
Poaceae	Zea mays	3	Zm00001eb287070_P001, Zm00001eb332930_P001 ... Zm00001eb374910_P001
Poaceae	Zoysia japonica	2	nbis-gene-23691, nbis-gene-5030
Poaceae	Zoysia macrostachya	4	Zma_g28156, Zma_g29219, Zma_g7343, Zma_g9675
Portulacaceae	Portulaca oleracea	8	evm.TU.LG10.396, evm.TU.LG17.393, evm.TU.LG18.1690 ... evm.TU.LG19.1003, evm.TU.LG19.1005, evm.TU.LG20.194, evm.TU.LG24.1010, evm.TU.LG24.1012
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g04030, gene.Posoc02g23860, gene.Posoc03g12120 ... gene.Posoc05g13690
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_10_RagTag.876, evm.TU.Scaffold_11_RagTag.73 ... evm.TU.Scaffold_13_RagTag.987
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-13599, nbisL1-mrna-7168
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12484, nbisL1-mrna-17179, nbisL1-mrna-4876
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-14495, nbisL1-mrna-16350, nbisL1-mrna-9127
Rhizophoraceae	Kandelia candel	2	add.evm.TU.utg000005l.139, evm.TU.utg000004l.192
Rhizophoraceae	Kandelia obovata	2	Maker00003935, Maker00015504
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-255, nbisL1-mrna-3753, nbisL1-mrna-4494
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-20807, nbisL1-mrna-22063, nbisL1-mrna-7835
Salicaceae	Populus euphratica	6	populus_peu01786, populus_peu04723, populus_peu12954 ... populus_peu35056, populus_peu36032, populus_peu37280
Solanaceae	Lycium barbarum	3	gene-LOC132600474, gene-LOC132636155, gene-LOC132643650
Solanaceae	Solanum chilense	2	SOLCI006039000, SOLCI006236600
Solanaceae	Solanum pennellii	2	gene-LOC107003047, gene-LOC107026711
Tamaricaceae	Reaumuria soongarica	3	gene_14393, gene_7304, gene_9765
Tamaricaceae	Tamarix chinensis	2	TC01G1445, TC01G3908
Zosteraceae	Zostera marina	5	Zosma01g41290.v3.1, Zosma01g41300.v3.1, Zosma03g01870.v3.1 ... Zosma06g16050.v3.1, Zosma06g16100.v3.1