Basic Information
Locus ID:
jg35497
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 3228738 | 3229271 | + | jg35497 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 18,818.85 Da | 53.92 | 84.46 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 177 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg35497, jg35498, jg8622 |
| Apiaceae | Apium graveolens | 1 | Ag9G02874 |
| Arecaceae | Cocos nucifera | 2 | COCNU_09G009030, COCNU_09G009040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723568 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1934.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri12G32306 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G24760.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10002571m.g.v1.0, Thhalv10016113m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g22500.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB01g035790.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G2016 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G2125 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2998 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1531 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015110 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8AG0641420 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.1192 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11658 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9067 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11254 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000003l.252, add.evm.TU.utg000006l.272 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00009451, Maker00013602 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-1386, nbisL1-mrna-20675 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19892 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132607394 |
| Solanaceae | Solanum chilense | 1 | SOLCI004651400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021218 |