Basic Information
Locus ID:
jg34936
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 13756270 | 13757814 | + | jg34936 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 36,486.01 Da | 32.64 | 87.97 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 25 | 325 | 5.0E-76 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 20 | 328 | 5.36E-83 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 325 | 7.7E-101 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 4 | 266 | 2.0E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 278 | 334 | 0.43 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 12 | 326 | 49.608829 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_047971998.1 | homocysteine S-methyltransferase 1 [Salvia hispanica] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A830BC39 | Homocysteine s-methyltransferase 1 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_000608600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology