Basic Information
Locus ID:
jg34828
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 12968876 | 12972028 | + | jg34828 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 115,521.80 Da | 34.91 | 99.82 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 773 | 972 | 8.5E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 60 | 1.1E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 242 | 264 | 0.92 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 754 | 1042 | 4.18E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 110 | 459 | 1.8E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 488 | 642 | 9.35E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 474 | 655 | 2.6E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 848 | 1047 | 1.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 333 | 1.7E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 467 | 2.7E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 738 | 846 | 3.6E-30 | - |
| SMART | SM00369 | LRR_typ_2 | 578 | 601 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 191 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 214 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 602 | 626 | 56.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 771 | 1045 | 1.7E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 288 | 312 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 771 | 1050 | 38.647316 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 891 | 903 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 777 | 799 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_011101764.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Sesamum indicum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9HGR8 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10592 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology