Basic Information
Locus ID:
jg34803
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 12800590 | 12803125 | + | jg34803 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 50,306.24 Da | 62.52 | 59.59 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 394 | 451 | 1.4E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 223 | 279 | 2.0E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 220 | 281 | 8.37E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 385 | 453 | 3.66E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 378 | 454 | 9.9E-34 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 208 | 282 | 3.3E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 222 | 280 | 1.5E-35 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 393 | 452 | 2.1E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 217 | 281 | 23.663017 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 388 | 453 | 36.712822 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_011070970.1 | probable WRKY transcription factor 3 isoform X2 [Sesamum indicum] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9SN34 | probable WRKY transcription factor 3 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105156515 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology