Basic Information
Locus ID:
jg34553
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 10599819 | 10604784 | - | jg34553 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 56,814.80 Da | 42.15 | 82.38 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 275 | 358 | 1.67E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 226 | 269 | 4.58E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 443 | 1.4E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 220 | 267 | 10.027357 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_011086726.1 | LOW QUALITY PROTEIN: F-box protein SKIP14 [Sesamum indicum] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TT00 | LOW QUALITY PROTEIN: F-box protein SKIP14 OS=Sesamum indicum OX=4182 GN=LOC105168365 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology