Basic Information
Locus ID:
jg34331
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 4334533 | 4338657 | - | jg34331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 82,834.30 Da | 50.44 | 84.34 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 19 | 167 | 5.45481E-53 | - |
| Pfam | PF00582 | Universal stress protein family | 20 | 157 | 2.3E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 426 | 678 | 1.3E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 683 | 2.13E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 22 | 154 | 5.69E-9 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 173 | 2.9E-11 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 405 | 497 | 2.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 702 | 3.6E-47 | - |
| SMART | SM00220 | serkin_6 | 425 | 692 | 4.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 425 | 688 | 36.258671 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 543 | 555 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 301 | - | - |
| Coils | Coil | Coil | 320 | 340 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_011077010.1 | U-box domain-containing protein 52 [Sesamum indicum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T282 | U-box domain-containing protein 52 OS=Sesamum indicum OX=4182 GN=LOC105161118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology