Basic Information
Locus ID:
jg34299
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 3852531 | 3860131 | + | jg34299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 107,935.02 Da | 38.56 | 85.96 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 799 | 932 | 2.3E-15 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 125 | 161 | 2.3E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 706 | 938 | 3.61E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 145 | 492 | 2.38E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 958 | 2.2E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 126 | 281 | 7.6E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 382 | 523 | 6.5E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 699 | 785 | 3.8E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 381 | 1.1E-19 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 607 | 936 | 10.817471 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 732 | 754 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 957 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 961 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011084699.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Sesamum indicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TGX5 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Sesamum indicum OX=4182 GN=LOC105166889 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology