Basic Information
Locus ID:
jg33199
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Nascent polypeptide-associated complex
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 11347129 | 11349639 | - | jg33199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 21,607.70 Da | 53.69 | 73.76 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 151 | 196 | 1.57789E-18 | - |
| Pfam | PF01849 | NAC domain | 59 | 114 | 2.0E-23 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 157 | 196 | 9.6E-13 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 158 | 195 | 3.8E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 65 | 118 | 4.4E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 59 | 115 | 4.3E-27 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 25 | 197 | 1.3E-62 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 56 | 121 | 18.061785 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 45 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_011079103.1 | nascent polypeptide-associated complex subunit alpha-like protein isoform X2 [Sesamum indicum] | 0 |
| Q9M612 | Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T9Y6 | nascent polypeptide-associated complex subunit alpha-like protein isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105162707 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology