Basic Information
Locus ID:
jg33110
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 10305237 | 10308879 | + | jg33110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 69,407.48 Da | 40.85 | 94.89 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 3.3E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 118 | 178 | 2.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 303 | 568 | 2.4E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 569 | 2.46E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 192 | 5.29E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 209 | 1.2E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 587 | 2.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 375 | 1.4E-33 | - |
| SMART | SM00220 | serkin_6 | 299 | 568 | 2.3E-28 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 119 | 142 | 7.303818 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 584 | 34.124435 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011079354.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Sesamum indicum] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T5S3 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Sesamum indicum OX=4182 GN=LOC105162890 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology