Basic Information
Locus ID:
jg33058
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 9394457 | 9397139 | - | jg33058 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 69,675.02 Da | 49.54 | 102.12 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 383 | 406 | 1.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 490 | 511 | 1.1 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 569 | 590 | 0.11 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 250 | 274 | 0.089 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 225 | 248 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 60 | 101 | 2.49E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 185 | 426 | 1.1E-38 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 360 | 650 | 1.12E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 454 | 654 | 4.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 264 | 453 | 1.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 263 | 1.5E-22 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 543 | 568 | 0.028 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 277 | 302 | 0.011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 569 | 593 | 0.26 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 516 | 541 | 8.8E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 9.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 383 | 408 | 0.0083 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 463 | 488 | 70.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 199 | 224 | 0.045 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 409 | 434 | 94.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 357 | 382 | 0.15 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 251 | 276 | 5.8E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 595 | 620 | 7.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 225 | 250 | 2.5E-5 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_011078374.1 | EIN3-binding F-box protein 1-like [Sesamum indicum] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T867 | EIN3-binding F-box protein 1-like OS=Sesamum indicum OX=4182 GN=LOC105162122 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology