Basic Information
Locus ID:
jg32970
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 5521431 | 5525628 | - | jg32970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 112,100.10 Da | 41.32 | 99.60 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 9.1E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 695 | 789 | 1.6E-14 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 511 | 565 | 1.7E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 123 | 143 | 0.59 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 292 | 312 | 1.4 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 71 | 6.5E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 794 | 919 | 1.1E-10 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 384 | 3.37E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 291 | 593 | 4.08E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 928 | 1.01E-46 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 186 | 4.5E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 290 | 1.1E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 947 | 9.3E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 393 | 2.5E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 676 | 772 | 8.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 394 | 621 | 3.7E-58 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 42.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 929 | 13.050642 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 292 | 314 | 7.226811 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 699 | 722 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011078243.1 | receptor-like protein kinase HSL1 [Sesamum indicum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T3G9 | receptor-like protein kinase HSL1 OS=Sesamum indicum OX=4182 GN=LOC105162038 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology