Basic Information
Locus ID:
jg32815
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
PRK1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 2789293 | 2791885 | - | jg32815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 80,290.05 Da | 40.46 | 92.83 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 422 | 693 | 1.5E-25 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 99 | 140 | 1.0E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 193 | 251 | 1.1E-11 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 105 | 301 | 6.8E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 697 | 2.16E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 97 | 261 | 6.5E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 710 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 263 | 304 | 8.1E-9 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 494 | 6.1E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 707 | 26.393137 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 425 | 447 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 393 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_012850189.1 | PREDICTED: pollen receptor-like kinase 1 [Erythranthe guttata] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A022QG54 | Protein kinase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002630mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology