Basic Information
Locus ID:
jg3256
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 950018 | 968926 | + | jg3256 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 66,091.33 Da | 38.68 | 90.14 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 54 | 312 | 4.52719E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 55 | 313 | 1.2E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 431 | 494 | 1.5E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 360 | 420 | 7.3E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 520 | 8.22E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 336 | 1.48E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 7.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 140 | 1.1E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 497 | 1.8E-52 | - |
| SMART | SM00220 | serkin_6 | 55 | 313 | 2.1E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 468 | 496 | 1.9E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 396 | 424 | 0.054 | IPR002048 |
| SMART | SM00054 | efh_1 | 432 | 460 | 9.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 360 | 388 | 1.5E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 14.094975 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 464 | 499 | 14.290241 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 392 | 427 | 9.129593 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 46.746098 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 477 | 489 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 369 | 381 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_051131937.1 | calcium-dependent protein kinase 13 [Andrographis paniculata] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8M8V9U3 | calcium-dependent protein kinase 13 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105174573 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology