Basic Information
Locus ID:
jg32367
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Mitochondrial DNA repair protein recA homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ScioBoG_12587_HRSCAF_12638 | 1 | 452 | - | jg32367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 15,659.38 Da | 31.32 | 84.07 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 26 | 150 | 4.3E-64 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 23 | 149 | 1.19E-30 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 52 | 150 | 1.2E-43 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 54 | 150 | 24.435225 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 146 | 150 | 8.2E-12 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 112 | 141 | 8.2E-12 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79050.2 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_052208207.1 | DNA repair protein recA homolog 1, chloroplastic isoform X6 [Diospyros lotus] | 0 |
| A1WXK7 | Protein RecA OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=349124 GN=recA PE=3 SV=1 | 0 | |
| TrEMBL | A0A084IGI6 | Protein RecA OS=Salinisphaera hydrothermalis (strain C41B8) OX=1304275 GN=recA PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology