Basic Information
Locus ID:
jg32053
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
L-type lectin-domain containing receptor kinase VIII.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 12040429 | 12042594 | + | jg32053 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 77,095.73 Da | 28.39 | 87.18 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 261 | 1.6928E-68 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 388 | 655 | 1.92189E-95 | - |
| Pfam | PF00139 | Legume lectin domain | 33 | 265 | 1.3E-56 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 383 | 653 | 1.5E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 687 | 1.91E-80 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 268 | 7.93E-59 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 457 | 1.6E-32 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 31 | 271 | 6.6E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 676 | 5.6E-61 | - |
| SMART | SM00220 | serkin_6 | 382 | 655 | 4.8E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 382 | 664 | 38.44944 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 143 | 149 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 388 | 411 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 501 | 513 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 308 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011094691.1 | L-type lectin-domain containing receptor kinase VIII.1 [Sesamum indicum] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UJZ8 | L-type lectin-domain containing receptor kinase VIII.1 OS=Sesamum indicum OX=4182 GN=LOC105174328 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology