Basic Information
Locus ID:
jg31913
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 10685021 | 10685621 | - | jg31913 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 19,029.31 Da | 51.92 | 70.55 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 112 | 169 | 2.71E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 95 | 180 | 3.8E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_011077805.1 | receptor protein kinase TMK1 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9T2N5 | receptor protein kinase TMK1 OS=Sesamum indicum OX=4182 GN=LOC105161714 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31913 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_067803, gene-QYE76_071318 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-7334 |