Basic Information
Locus ID:
jg31807
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
PRK1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 9613016 | 9615821 | + | jg31807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 76,258.57 Da | 49.51 | 94.42 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 68 | 111 | 7.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 163 | 223 | 1.0E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 388 | 588 | 3.9E-26 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 104 | 272 | 4.16E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 659 | 1.11E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 462 | 680 | 1.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 275 | 6.9E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 460 | 1.1E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 232 | 4.3E-34 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 672 | 24.188234 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 41 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_051149643.1 | pollen receptor-like kinase 2 [Andrographis paniculata] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A022QG54 | Protein kinase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002630mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology