Basic Information
Locus ID:
jg31658
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 5250827 | 5253967 | + | jg31658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 111,521.55 Da | 34.54 | 101.63 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 697 | 975 | 1.5175E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 5.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 74 | 130 | 7.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 290 | 312 | 0.034 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 575 | 596 | 0.71 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 693 | 971 | 2.1E-45 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 383 | 3.45E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 974 | 4.99E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 291 | 596 | 2.21E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 390 | 621 | 1.2E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 208 | 2.0E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 658 | 770 | 3.4E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 989 | 4.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 389 | 4.4E-50 | IPR032675 |
| SMART | SM00220 | serkin_6 | 691 | 974 | 2.7E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 336 | 360 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 981 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 825 | 837 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 291 | 304 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 550 | 563 | 3.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011078243.1 | receptor-like protein kinase HSL1 [Sesamum indicum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T3G9 | receptor-like protein kinase HSL1 OS=Sesamum indicum OX=4182 GN=LOC105162038 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology