Basic Information
Locus ID:
jg31467
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 1775083 | 1780024 | - | jg31467 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 43,270.67 Da | 37.63 | 96.09 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00830 | KAS_III | 66 | 380 | 6.00342E-135 | IPR004655 |
| Pfam | PF08545 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | 170 | 249 | 4.0E-27 | IPR013751 |
| Pfam | PF08541 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal | 310 | 377 | 5.6E-25 | IPR013747 |
| SUPERFAMILY | SSF53901 | Thiolase-like | 68 | 378 | 2.24E-56 | IPR016039 |
| Gene3D | G3DSA:3.40.47.10 | - | 64 | 385 | 2.3E-111 | IPR016039 |
| TIGRFAM | TIGR00747 | fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III | 67 | 378 | 2.1E-93 | IPR004655 |
| Hamap | MF_01815 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. | 65 | 382 | 58.348892 | IPR004655 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62640.1 | 3-ketoacyl-acyl carrier protein synthase III. 3-ketoacyl-acyl carrier protein synthase III (KAS III) | 0 |
| RefSeq | XP_011079297.1 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Sesamum indicum] | 0 |
| P49244 | Beta-ketoacyl-[acyl-carrier-protein] synthase III A, chloroplastic OS=Cuphea wrightii OX=35942 GN=KAS3A PE=2 SV=2 | 0 | |
| TrEMBL | A0A2G9H9X6 | Beta-ketoacyl-[acyl-carrier-protein] synthase III OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13273 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg15695, jg31467 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10884 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah000065, Ah004763 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g097880 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38496, Sbi_jg6599 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15327 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006702 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl01903, Sgl07033 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000004078, gene:ENSEOMG00000005590 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.5AG0000460, CQ.Regalona.r1.5AG0027370 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30142860 |
| Apiaceae | Apium graveolens | 3 | Ag11G04997, Ag6G00622, Ag8G00684 |
| Arecaceae | Cocos nucifera | 2 | COCNU_05G007100, COCNU_13G002320 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103713166, gene-LOC103716414 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.176.V1.1, AsparagusV1_05.3175.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri13G12543, Ftri16G22854, Ftri16G29099, Ftri2G22127 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G62640.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10023499m.g.v1.0, Thhalv10023762m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g02000.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB04g021510.2N |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq03G0026, Ceq03G0099, Ceq08G0002 |
| Casuarinaceae | Casuarina glauca | 5 | Cgl03G0032, Cgl03G0034, Cgl03G0103, Cgl05G1414, Cgl08G0002 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g00670 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0826s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g07820 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.1232 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00000499, Pov_00017300 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G09024, Lb2G12348 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2474, BH09.2695, CH09.2889 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_3AG0241120, gene-QOZ80_4AG0301980 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0205750.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_046665 |
| Poaceae | Oryza coarctata | 2 | Oco07G017270, Oco08G016640 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g55060.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G254900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0300801, Pt_Chr0300818 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G002680, Chr25G002140, Chr26G016660, Chr30G002110 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G885300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG072920, gene_TRIDC2BG079340 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G520200.2, TraesCS2B02G549400.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb068760_P002, Zm00001eb086810_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-22985, nbis-gene-6004 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20539, Zma_g22076 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.174, evm.TU.LG17.171 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g11980 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_14_RagTag.323, evm.TU.Scaffold_16_RagTag.305 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18055, nbisL1-mrna-22547 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-18176, nbisL1-mrna-5222 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-20224, nbisL1-mrna-8396 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000007l.174, evm.TU.utg000022l.309 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00014500, Maker00018286 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-16131, nbisL1-mrna-3448 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-10770, nbisL1-mrna-6574 |
| Salicaceae | Populus euphratica | 2 | populus_peu03400, populus_peu34243 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132609467, gene-LOC132632291 |
| Solanaceae | Solanum chilense | 1 | SOLCI004465400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107014754, gene-LOC107026917 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_14954 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G4440 |
| Zosteraceae | Zostera marina | 1 | Zosma01g25710.v3.1 |