Basic Information
Locus ID:
jg3143
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 202192 | 202485 | - | jg3143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 10,407.95 Da | 56.51 | 89.38 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 59 | 1.1E-5 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011095176.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Sesamum indicum] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9GKD4 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21794 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg16731, jg3143, jg38070 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg2111 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G004820 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9471 |
| Poaceae | Oryza coarctata | 1 | Oco09G012410 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG087690 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5703 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4640 |
| Zosteraceae | Zostera marina | 1 | Zosma02g17350.v3.1 |