Basic Information
Locus ID:
jg3142
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 182965 | 195299 | - | jg3142 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 101,158.08 Da | 37.48 | 96.77 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 622 | 722 | 5.6E-17 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 82 | 2.7E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 724 | 853 | 1.1E-13 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 330 | 4.49E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 605 | 878 | 1.31E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 580 | 695 | 1.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 704 | 875 | 9.3E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 204 | 1.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 387 | 7.5E-26 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 620 | 862 | 19.792559 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 626 | 648 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37450.3 | - | 0 |
| RefSeq | XP_011095176.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Sesamum indicum] | 0 |
| C0LGU1 | Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U779 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105174690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology