Basic Information
Locus ID:
jg30745
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr25 | 3182378 | 3185746 | - | jg30745 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 103,985.79 Da | 40.83 | 104.55 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 461 | 519 | 2.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 4.9E-7 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 98 | 115 | 0.48 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 148 | 206 | 1.1E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 691 | 777 | 1.1E-12 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 790 | 937 | 2.0E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 942 | 2.05E-49 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 377 | 1.41E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 365 | 620 | 3.23E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 207 | 6.8E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 681 | 766 | 3.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 314 | 632 | 1.6E-86 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 949 | 3.6E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 313 | 1.4E-28 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 947 | 18.16715 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 532 | 555 | 7.057395 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 695 | 717 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_011073656.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Sesamum indicum] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T0L0 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Sesamum indicum OX=4182 GN=LOC105158565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology