Basic Information
Locus ID:
jg30687
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr25 | 2343826 | 2348809 | - | jg30687 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 84,188.93 Da | 42.16 | 85.52 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 162 | 518 | 7.5E-28 | IPR024788 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 603 | 690 | 7.4E-9 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 341 | 520 | 6.1E-18 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 159 | 311 | 1.1E-19 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 743 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24010.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011099316.1 | probable receptor-like protein kinase At5g24010 [Sesamum indicum] | 0 |
| Q9FLW0 | Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana OX=3702 GN=At5g24010 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GM32 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21371 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg30686, jg30687, jg30689, jg30691, jg30692, jg39988 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30205610 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G02862 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000544m.g.v1.0 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22992 |