Basic Information
Locus ID:
jg30462
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr25 | 445146 | 447705 | - | jg30462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 41,090.50 Da | 38.22 | 64.73 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 51 | 191 | 3.1E-18 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 34 | 210 | 2.35E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 58 | 215 | 3.7E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 49 | 210 | 30.345203 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 249 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_011097382.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Sesamum indicum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UG24 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Sesamum indicum OX=4182 GN=LOC105176313 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology