Basic Information
Locus ID:
jg30119
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr32 | 8539032 | 8541206 | + | jg30119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 77,207.97 Da | 37.94 | 67.04 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 651 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_011092393.1 | uncharacterized protein LOC105172586 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9U473 | uncharacterized protein LOC105172586 OS=Sesamum indicum OX=4182 GN=LOC105172586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg30119 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10310 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g078210 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg17700, Sbi_jg62373 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg942 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00007284, GOSA_00007285 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl23983, Sgl29162 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000011162, gene:ENSEOMG00000040978 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0005800, CQ.Regalona.r1.4BG0005910 |
| Apiaceae | Apium graveolens | 1 | Ag9G00354 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G001450 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103701193 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.761.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G25363 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G0717 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0768 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g01050 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g18800 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11038 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.1170 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00002068 |
| Poaceae | Echinochloa crus-galli | 3 | BH06.1522, BH06.1530, CH06.1677 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0520770, gene-QOZ80_6BG0473280 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0677520.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco11G009160 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g27370.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G077300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0404002 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr11G016030, Chr14G006570, Chr21G006610 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G422900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG030430 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G236100.1.cds1, TraesCS7B02G134100.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb382360_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-43824 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31881 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.1473, evm.TU.LG20.406 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g21060 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1578 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18966 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000009l.118 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005929 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17828 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21833 |
| Salicaceae | Populus euphratica | 2 | populus_peu27979, populus_peu29422 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132598751 |
| Solanaceae | Solanum chilense | 1 | SOLCI000670400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021206 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.32121_chr09_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G1495 |
| Zosteraceae | Zostera marina | 1 | Zosma04g23950.v3.1 |