Basic Information
Locus ID:
jg30030
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr32 | 7616784 | 7628673 | + | jg30030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 102,542.61 Da | 35.73 | 94.64 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 611 | 870 | 1.42063E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 607 | 870 | 1.5E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 350 | 1.87E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 585 | 872 | 2.16E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 681 | 885 | 3.4E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 576 | 680 | 2.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 181 | 4.7E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 389 | 7.3E-37 | IPR032675 |
| SMART | SM00220 | serkin_6 | 605 | 878 | 1.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 605 | 878 | 39.551891 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 725 | 737 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 611 | 633 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011092239.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 [Sesamum indicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U5K7 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105172488 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology