Basic Information
Locus ID:
jg29756
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the ALG6 ALG8 glucosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr32 | 1679297 | 1686770 | + | jg29756 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 95,119.51 Da | 46.86 | 87.11 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 803 | 846 | 5.3E-12 | IPR001841 |
| Pfam | PF03155 | ALG6, ALG8 glycosyltransferase family | 21 | 430 | 9.0E-145 | IPR004856 |
| SUPERFAMILY | SSF57850 | RING/U-box | 783 | 852 | 1.82E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 769 | 851 | 3.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 804 | 845 | 9.4E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 804 | 846 | 12.828597 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 479 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44660.1 | ALG6, ALG8 glycosyltransferase family. | 0 |
| RefSeq | XP_011093488.1 | probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [Sesamum indicum] | 0 |
| O80505 | Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Arabidopsis thaliana OX=3702 GN=At2g44660 PE=2 SV=3 | 0 | |
| TrEMBL | A0A6I9U7Y8 | Alpha-1,3-glucosyltransferase OS=Sesamum indicum OX=4182 GN=LOC105173449 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg29754, jg29756 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_1277 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah023350 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg29105, Sbi_jg3319 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg6614 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000128 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl11458, Sgl16835, Sgl16851 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000015471, gene:ENSEOMG00000035572 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0007800, CQ.Regalona.r1.2BG0021730 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30001250 |
| Apiaceae | Apium graveolens | 1 | Ag5G01219 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G004430 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710756 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1258.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G02883 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G44660.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10001410m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g26740.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB05g032090.2N, BniB06g003070.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1010 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1019 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g04290 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0782s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g08840 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1156 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032438 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb0G37632 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.3043, BH07.2869, CH07.2948 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0141390, gene-QOZ80_2BG0196990 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0605090.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_024504, gene-QYE76_024563 |
| Poaceae | Oryza coarctata | 2 | Oco03G018500, Oco04G019250 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g46320.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G234900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0203780, Pt_Chr0203796 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G004840, Chr15G006350 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G486300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG040230, gene_TRIDC6BG047190 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G262300.1, TraesCS6B02G289600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb251030_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-22225, nbis-gene-9100 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14158 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG19.656, evm.TU.LG24.644 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g05940 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.231 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21952 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2799 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18603 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.668 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009367 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-6781 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12575 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645840 |
| Solanaceae | Solanum chilense | 1 | SOLCI001873500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011146 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3566 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0509 |
| Zosteraceae | Zostera marina | 1 | Zosma06g05630.v3.1 |