Basic Information
Locus ID:
jg29746
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr32 | 1609736 | 1612090 | + | jg29746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 41,143.72 Da | 45.11 | 82.77 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 148 | 280 | 1.2E-19 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 269 | 1.75E-43 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 53 | 189 | 4.3E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 190 | 280 | 5.4E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 365 | 22.138803 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 81 | 109 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 234 | 246 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47070.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011093490.1 | probable serine/threonine-protein kinase PBL19 [Sesamum indicum] | 0 |
| Q9LTC0 | Probable serine/threonine-protein kinase PBL19 OS=Arabidopsis thaliana OX=3702 GN=PBL19 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U0K0 | probable serine/threonine-protein kinase PBL19 OS=Sesamum indicum OX=4182 GN=LOC105173451 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29746 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00016988 |