Basic Information
Locus ID:
jg29603
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr32 | 368020 | 371722 | - | jg29603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 64,616.17 Da | 56.09 | 72.44 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 159 | 233 | 3.18998E-13 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 273 | 366 | 4.1E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 160 | 247 | 2.8E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 449 | 562 | 3.86E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 160 | 247 | 6.2E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 154 | 270 | 1.6E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 282 | 387 | 2.4E-13 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 436 | 561 | 3.6E-6 | IPR008974 |
| SMART | SM00875 | BACK_2 | 265 | 367 | 1.2E-7 | IPR011705 |
| SMART | SM00225 | BTB_4 | 150 | 250 | 9.5E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 150 | 219 | 12.598383 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 151 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_020549602.1 | BTB/POZ domain-containing protein POB1 isoform X1 [Sesamum indicum] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9GJ26 | BTB domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22159 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology