Basic Information
Locus ID:
jg29495
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 13101361 | 13102812 | + | jg29495 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 47,461.76 Da | 49.80 | 77.92 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 243 | 309 | 2.19902E-40 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 249 | 294 | 1.4E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 25 | 175 | 4.2E-37 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 248 | 308 | 1.17E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 244 | 320 | 1.0E-16 | IPR036638 |
| SMART | SM00353 | finulus | 251 | 300 | 4.8E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 245 | 294 | 17.193081 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 340 | - | - |
| Coils | Coil | Coil | 284 | 311 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_011094312.1 | transcription factor MYC2 [Sesamum indicum] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U585 | transcription factor MYC2 OS=Sesamum indicum OX=4182 GN=LOC105174042 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology