Basic Information
Locus ID:
jg29348
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 12025044 | 12028169 | - | jg29348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.66 | 37,107.10 Da | 35.18 | 84.59 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 113 | 177 | 9.1E-6 | IPR001245 |
| Pfam | PF00023 | Ankyrin repeat | 18 | 47 | 3.3E-5 | IPR002110 |
| Pfam | PF00069 | Protein kinase domain | 184 | 254 | 1.8E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 112 | 315 | 7.11E-43 | IPR011009 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 4 | 97 | 4.54E-11 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 2 | 84 | 2.1E-12 | IPR036770 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 179 | 256 | 1.2E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 257 | 326 | 6.1E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 178 | 1.5E-15 | - |
| SMART | SM00248 | ANK_2a | 16 | 45 | 1.5E-4 | IPR002110 |
| PIRSF | PIRSF000654 | ILK | 251 | 324 | 1.5E-12 | - |
| PIRSF | PIRSF000654 | ILK | 182 | 260 | 1.7E-18 | - |
| PIRSF | PIRSF000654 | ILK | 1 | 184 | 4.3E-28 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 16 | 48 | 13.59756 | IPR002110 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 312 | 17.686594 | IPR000719 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 16 | 48 | 12.22224 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 113 | 134 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14000.1 | VH1-interacting kinase. Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. | 0 |
| RefSeq | XP_012843719.1 | PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Erythranthe guttata] | 0 |
| Q9XI87 | Serine/threonine-protein kinase VIK OS=Arabidopsis thaliana OX=3702 GN=VIK PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UAJ1 | serine/threonine-protein kinase STY8-like OS=Sesamum indicum OX=4182 GN=LOC105174373 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29348 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30010930 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1310.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri5G14906 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6135, nbisL1-mrna-9505 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00016722 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.488 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21756 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-7321, nbisL1-mrna-7322, nbisL1-mrna-7323 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.269 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017523 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19640 |
| Salicaceae | Populus euphratica | 1 | populus_peu31675 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132610332 |
| Solanaceae | Solanum chilense | 1 | SOLCI005577300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107032428 |